Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5AL_88742DFC7 Traes_5AL_88742DFC7 |
ta_iwgsc_5al_v1_2787829 | 803 | 5023 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5AL_88742DFC7.6 Traes_5AL_88742DFC7.6 PAC:31934384 |
High | No | 490 | Get ORF Coding potential... Type: noncoding Potential: -0.988 Folding energies... MFEI: -29.531 AMFE: -0.637 GC content %: 46.327 | |
Taestivum_Traes_5AL_88742DFC7.7 Traes_5AL_88742DFC7.7 PAC:31934385 |
High | No | 270 | Get ORF Coding potential... Type: noncoding Potential: -1.420 Folding energies... MFEI: -28.963 AMFE: -0.588 GC content %: 49.259 |