Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5AL_891AC79CE Traes_5AL_891AC79CE |
ta_iwgsc_5al_v1_2762156 | 468 | 2312 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5AL_891AC79CE.1 Traes_5AL_891AC79CE.1 PAC:31811138 |
Low | No | 212 | Get ORF Coding potential... Type: noncoding Potential: -0.091 Folding energies... MFEI: -29.245 AMFE: -0.569 GC content %: 51.415 | |
Taestivum_Traes_5AL_891AC79CE.2 Traes_5AL_891AC79CE.2 PAC:31811140 |
Low | No | 313 | Get ORF Coding potential... Type: noncoding Potential: -0.177 Folding energies... MFEI: -30.511 AMFE: -0.582 GC content %: 52.396 | |
Taestivum_Traes_5AL_891AC79CE.3 Traes_5AL_891AC79CE.3 PAC:31811139 |
Low | No | 291 | Get ORF Coding potential... Type: noncoding Potential: -0.170 Folding energies... MFEI: -32.509 AMFE: -0.591 GC content %: 54.983 |