Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5AL_BBFE7756D Traes_5AL_BBFE7756D |
ta_iwgsc_5al_v1_2689879 | 136 | 3552 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5AL_BBFE7756D.12 Traes_5AL_BBFE7756D.12 PAC:31872760 |
High | No | 878 | Get ORF Coding potential... Type: noncoding Potential: -1.308 Folding energies... MFEI: -23.599 AMFE: -0.595 GC content %: 39.636 | |
Taestivum_Traes_5AL_BBFE7756D.13 Traes_5AL_BBFE7756D.13 PAC:31872759 |
Low | No | 554 | Get ORF Coding potential... Type: noncoding Potential: -0.212 Folding energies... MFEI: -21.300 AMFE: -0.539 GC content %: 39.531 |