Gene

Taestivum Traes 5AL F7E6EB5BF

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_5AL_F7E6EB5BF
Traes_5AL_F7E6EB5BF
ta_iwgsc_5al_v1_2780093 2 4436 Phytozome v2.2 Triticum_aestivum
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_5AL_F7E6EB5BF.6
Traes_5AL_F7E6EB5BF.6
PAC:31821328
High No 423
Coding potential...
Type: noncoding Potential: -1.213
Folding energies...
MFEI: -20.544 AMFE: -0.572
GC content
%: 35.934


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Traes_5AL_F7E6EB5BF.png