Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5BL_1C0FFBD1D Traes_5BL_1C0FFBD1D |
ta_iwgsc_5bl_v1_10919400 | 1 | 241 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5BL_1C0FFBD1D.1 Traes_5BL_1C0FFBD1D.1 PAC:32003168 |
Low | No | 241 | Get ORF Coding potential... Type: noncoding Potential: -0.796 Folding energies... MFEI: -20.830 AMFE: -0.564 GC content %: 36.929 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_5BL_1C0FFBD1D.1 | RepBase (RepeatMasker) | 2014-01-31 | RMU1A23 |