Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5BL_441EF4D2C Traes_5BL_441EF4D2C |
ta_iwgsc_5bl_v1_10921924 | 8989 | 10778 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5BL_441EF4D2C.2 Traes_5BL_441EF4D2C.2 PAC:31888472 |
Low | No | 223 | Get ORF Coding potential... Type: noncoding Potential: -1.139 Folding energies... MFEI: -22.646 AMFE: -0.526 GC content %: 43.049 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_5BL_441EF4D2C.2 | RepBase (RepeatMasker) | 2014-01-31 | Helitron-3_SBi |