Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5BL_86CCF80B0 Traes_5BL_86CCF80B0 |
ta_iwgsc_5bl_v1_10896861 | 4 | 2523 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5BL_86CCF80B0.1 Traes_5BL_86CCF80B0.1 PAC:31862124 |
High | No | 2511 | Get ORF Coding potential... Type: noncoding Potential: -0.764 Folding energies... MFEI: -35.376 AMFE: -0.641 GC content %: 55.157 | |
Taestivum_Traes_5BL_86CCF80B0.2 Traes_5BL_86CCF80B0.2 PAC:31862123 |
High | No | 954 | Get ORF Coding potential... Type: noncoding Potential: -0.625 Folding energies... MFEI: -37.338 AMFE: -0.646 GC content %: 57.757 |