Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5BL_C1D6B6B74 Traes_5BL_C1D6B6B74 |
ta_iwgsc_5bl_v1_10926070 | 17565 | 25781 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5BL_C1D6B6B74.4 Traes_5BL_C1D6B6B74.4 PAC:31904382 |
High | No | 574 | Get ORF Coding potential... Type: noncoding Potential: -0.943 Folding energies... MFEI: -40.871 AMFE: -0.653 GC content %: 62.544 | |
Taestivum_Traes_5BL_C1D6B6B74.5 Traes_5BL_C1D6B6B74.5 PAC:31904379 |
Low | No | 863 | Get ORF Coding potential... Type: noncoding Potential: -0.996 Folding energies... MFEI: -38.313 AMFE: -0.665 GC content %: 57.590 |