Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_6AL_44C75161B Traes_6AL_44C75161B |
ta_iwgsc_6al_v1_5714819 | 168 | 977 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_6AL_44C75161B.1 Traes_6AL_44C75161B.1 PAC:31984710 |
High | No | 646 | Get ORF Coding potential... Type: noncoding Potential: -0.686 Folding energies... MFEI: -30.944 AMFE: -0.579 GC content %: 53.406 | |
Taestivum_Traes_6AL_44C75161B.2 Traes_6AL_44C75161B.2 PAC:31984709 |
High | No | 314 | Get ORF Coding potential... Type: noncoding Potential: -0.733 Folding energies... MFEI: -30.860 AMFE: -0.535 GC content %: 57.643 | |
Taestivum_Traes_6AL_44C75161B.3 Traes_6AL_44C75161B.3 PAC:31984711 |
High | No | 617 | Get ORF Coding potential... Type: noncoding Potential: -0.955 Folding energies... MFEI: -32.836 AMFE: -0.581 GC content %: 56.564 |