Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_6AL_DB9F9FA25 Traes_6AL_DB9F9FA25 |
ta_iwgsc_6al_v1_5755258 | 1704 | 3414 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_6AL_DB9F9FA25.1 Traes_6AL_DB9F9FA25.1 PAC:31944130 |
High | No | 1229 | Get ORF Coding potential... Type: noncoding Potential: -0.828 Folding energies... MFEI: -25.989 AMFE: -0.667 GC content %: 38.975 | |
Taestivum_Traes_6AL_DB9F9FA25.2 Traes_6AL_DB9F9FA25.2 PAC:31944129 |
High | No | 593 | Get ORF Coding potential... Type: noncoding Potential: -0.648 Folding energies... MFEI: -25.970 AMFE: -0.583 GC content %: 44.519 | |
Taestivum_Traes_6AL_DB9F9FA25.3 Traes_6AL_DB9F9FA25.3 PAC:31944131 |
High | No | 357 | Get ORF Coding potential... Type: noncoding Potential: -0.662 Folding energies... MFEI: -21.064 AMFE: -0.492 GC content %: 42.857 |