Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_6AS_9852C345F Traes_6AS_9852C345F |
ta_iwgsc_6as_v1_1803615 | 4 | 796 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_6AS_9852C345F.1 Traes_6AS_9852C345F.1 PAC:31883053 |
Low | No | 536 | Get ORF Coding potential... Type: coding Potential: 0.033 Folding energies... MFEI: -30.728 AMFE: -0.641 GC content %: 47.948 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_6AS_9852C345F.1 | RepBase (RepeatMasker) | 2014-01-31 | EnSpm-N1_HV |