Gene

Taestivum Traes 6DS 9B68C1F2A

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_6DS_9B68C1F2A
Traes_6DS_9B68C1F2A
ta_iwgsc_6ds_v1_2109837 6456 12019 Phytozome v2.2 Triticum_aestivum
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_6DS_9B68C1F2A.1
Traes_6DS_9B68C1F2A.1
PAC:31924996
Low No 369
Coding potential...
Type: noncoding Potential: -0.946
Folding energies...
MFEI: -26.721 AMFE: -0.640
GC content
%: 41.734


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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