Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_7AL_8A4CF593F Traes_7AL_8A4CF593F |
ta_iwgsc_7al_v1_4448922 | 169 | 3298 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_7AL_8A4CF593F.5 Traes_7AL_8A4CF593F.5 PAC:32005048 |
Low | No | 662 | Get ORF Coding potential... Type: noncoding Potential: -0.833 Folding energies... MFEI: -26.450 AMFE: -0.602 GC content %: 43.958 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_7AL_8A4CF593F.5 | RepBase (RepeatMasker) | 2014-01-31 | Copia-79_ST-I |