Gene

Taestivum Traes 7AS 0A3433820

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_7AS_0A3433820
Traes_7AS_0A3433820
ta_iwgsc_7as_v1_4173936 1 2595 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_7AS_0A3433820.1
Traes_7AS_0A3433820.1
PAC:31824782
Low No 736
Coding potential...
Type: noncoding Potential: -0.704
Folding energies...
MFEI: -33.220 AMFE: -0.613
GC content
%: 54.212
Taestivum_Traes_7AS_0A3433820.2
Traes_7AS_0A3433820.2
PAC:31824781
Low No 739
Coding potential...
Type: noncoding Potential: -0.717
Folding energies...
MFEI: -33.166 AMFE: -0.613
GC content
%: 54.127


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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