Gene

Taestivum Traes 7AS ADEF67B9C

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_7AS_ADEF67B9C
Traes_7AS_ADEF67B9C
ta_iwgsc_7as_v1_4252405 1907 2694 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_7AS_ADEF67B9C.1
Traes_7AS_ADEF67B9C.1
PAC:31775899
Low No 708
Coding potential...
Type: noncoding Potential: -0.334
Folding energies...
MFEI: -29.435 AMFE: -0.668
GC content
%: 44.068
Taestivum_Traes_7AS_ADEF67B9C.2
Traes_7AS_ADEF67B9C.2
PAC:31775898
High No 546
Coding potential...
Type: noncoding Potential: -0.907
Folding energies...
MFEI: -29.707 AMFE: -0.676
GC content
%: 43.956


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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