Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_7AS_D5FAE55F5 Traes_7AS_D5FAE55F5 |
ta_iwgsc_7as_v1_4250079 | 772 | 2335 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_7AS_D5FAE55F5.1 Traes_7AS_D5FAE55F5.1 PAC:31963408 |
Low | No | 663 | Get ORF Coding potential... Type: noncoding Potential: -0.522 Folding energies... MFEI: -28.311 AMFE: -0.636 GC content %: 44.495 | |
Taestivum_Traes_7AS_D5FAE55F5.2 Traes_7AS_D5FAE55F5.2 PAC:31963407 |
Low | No | 803 | Get ORF Coding potential... Type: noncoding Potential: -0.242 Folding energies... MFEI: -28.468 AMFE: -0.651 GC content %: 43.711 | |
Taestivum_Traes_7AS_D5FAE55F5.3 Traes_7AS_D5FAE55F5.3 PAC:31963409 |
High | No | 511 | Get ORF Coding potential... Type: noncoding Potential: -0.548 Folding energies... MFEI: -22.368 AMFE: -0.560 GC content %: 39.922 |