Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_7AS_E41AF7D8D Traes_7AS_E41AF7D8D |
ta_iwgsc_7as_v1_4252063 | 1082 | 2021 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_7AS_E41AF7D8D.1 Traes_7AS_E41AF7D8D.1 PAC:31941765 |
Low | No | 600 | Get ORF Coding potential... Type: noncoding Potential: -0.856 Folding energies... MFEI: -18.233 AMFE: -0.608 GC content %: 30.000 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_7AS_E41AF7D8D.1 | RepBase (RepeatMasker) | 2014-01-31 | EnSpm-42_SBi |