Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_7BS_9E75B3F18 Traes_7BS_9E75B3F18 |
ta_iwgsc_7bs_v1_3128359 | 1154 | 1623 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_7BS_9E75B3F18.1 Traes_7BS_9E75B3F18.1 PAC:32015585 |
Low | No | 470 | Get ORF Coding potential... Type: noncoding Potential: -0.617 Folding energies... MFEI: -27.043 AMFE: -0.626 GC content %: 43.191 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_7BS_9E75B3F18.1 | RepBase (RepeatMasker) | 2014-01-31 | MuDR-19_SBi |