Gene

Taestivum Traes 7DS 189F45C8E

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_7DS_189F45C8E
Traes_7DS_189F45C8E
ta_iwgsc_7ds_v1_3949420 146 2694 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_7DS_189F45C8E.1
Traes_7DS_189F45C8E.1
PAC:31736349
High No 2549
Coding potential...
Type: noncoding Potential: -1.323
Folding energies...
MFEI: -26.850 AMFE: -0.678
GC content
%: 39.623


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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