Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG000476 Thecc1EG000476 |
scaffold_1 | 1957837 | 1960057 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG000476t1 Thecc1EG000476t1 PAC:27431560 |
High | No | 1418 | Get ORF Coding potential... Type: noncoding Potential: -1.105 Folding energies... MFEI: -20.137 AMFE: -0.507 GC content %: 39.704 |