Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG003131 Thecc1EG003131 |
scaffold_1 | 19474857 | 19475717 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG003131t1 Thecc1EG003131t1 PAC:27435429 |
High | No | 861 | Get ORF Coding potential... Type: noncoding Potential: -0.810 Folding energies... MFEI: -21.974 AMFE: -0.591 GC content %: 37.166 |