Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG005301 Thecc1EG005301 |
scaffold_1 | 35997674 | 35998527 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG005301t1 Thecc1EG005301t1 PAC:27437448 |
High | No | 718 | Get ORF Coding potential... Type: noncoding Potential: -1.175 Folding energies... MFEI: -25.975 AMFE: -0.740 GC content %: 35.097 |