Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG005812 Thecc1EG005812 |
scaffold_1 | 38338301 | 38339990 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG005812t1 Thecc1EG005812t1 PAC:27436825 |
High | No | 1577 | Get ORF Coding potential... Type: noncoding Potential: -1.051 Folding energies... MFEI: -24.350 AMFE: -0.631 GC content %: 38.618 |