Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG010669 Thecc1EG010669 |
scaffold_2 | 34859631 | 34860545 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG010669t1 Thecc1EG010669t1 PAC:27462126 |
High | No | 915 | Get ORF Coding potential... Type: noncoding Potential: -0.156 Folding energies... MFEI: -24.251 AMFE: -0.677 GC content %: 35.847 |