Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG026532 Thecc1EG026532 |
scaffold_5 | 38873497 | 38876141 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG026532t1 Thecc1EG026532t1 PAC:27424069 |
High | No | 552 | Get ORF Coding potential... Type: noncoding Potential: -1.010 Folding energies... MFEI: -21.812 AMFE: -0.673 GC content %: 32.428 |