Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01000310001 GSVIVG01000310001 |
chrUn | 2881203 | 2882126 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01000310001 GSVIVT01000310001 PAC:17816870 |
Low | No | 351 | Get ORF Coding potential... Type: noncoding Potential: -0.670 Folding energies... MFEI: -22.279 AMFE: -0.611 GC content %: 36.467 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01000310001 | SwissProt | 2015-06-01 | Q9ZVJ6 | 3.0e-11 |