Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01004646001 GSVIVG01004646001 |
chrUn | 39337842 | 39338166 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01004646001 GSVIVT01004646001 PAC:17819086 |
Low | No | 325 | Get ORF Coding potential... Type: noncoding Potential: -0.912 Folding energies... MFEI: -22.646 AMFE: -0.663 GC content %: 34.154 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01004646001 | SwissProt | 2015-06-01 | O81304 | 3.0e-10 |