Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01005904001 GSVIVG01005904001 |
chr16_random | 695182 | 696499 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01005904001 GSVIVT01005904001 PAC:17819639 |
Low | No | 356 | Get ORF Coding potential... Type: noncoding Potential: -0.261 Folding energies... MFEI: -17.640 AMFE: -0.532 GC content %: 33.146 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01005904001 | SwissProt | 2015-06-01 | Q8L7R3 | 3.0e-11 |