Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01009425001 GSVIVG01009425001 |
chr18 | 8244437 | 8245150 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01009425001 GSVIVT01009425001 PAC:17821842 |
Low | No | 300 | Get ORF Coding potential... Type: noncoding Potential: -0.699 Folding energies... MFEI: -22.800 AMFE: -0.543 GC content %: 42.000 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01009425001 | SwissProt | 2015-06-01 | Q9FGQ6 | 3.0e-8 |