Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01010894001 GSVIVG01010894001 |
chr11 | 16161576 | 16188558 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01010894001 GSVIVT01010894001 PAC:17822918 |
Low | No | 278 | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -13.993 AMFE: -0.474 GC content %: 29.496 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01010894001 | SwissProt | 2015-06-01 | A4QJA6 | 1.0e-26 |