Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01012241001 GSVIVG01012241001 |
chr1 | 279894 | 281109 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01012241001 GSVIVT01012241001 PAC:17823943 |
Low | No | 329 | Get ORF Coding potential... Type: noncoding Potential: -0.748 Folding energies... MFEI: -24.225 AMFE: -0.546 GC content %: 44.377 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01012241001 | SwissProt | 2015-06-01 | Q69F95 | 4.0e-42 |