Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01016059001 GSVIVG01016059001 |
chr9 | 18152990 | 18153339 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01016059001 GSVIVT01016059001 PAC:17826589 |
Low | No | 350 | Get ORF Coding potential... Type: noncoding Potential: -1.044 Folding energies... MFEI: -22.371 AMFE: -0.567 GC content %: 39.429 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01016059001 | RepBase (RepeatMasker) | 2014-01-31 | Gypsy8-VV_I-int |