Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01019513001 GSVIVG01019513001 |
chr2 | 1239610 | 1240527 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01019513001 GSVIVT01019513001 PAC:17829121 |
Low | No | 698 | Get ORF Coding potential... Type: noncoding Potential: -0.370 Folding energies... MFEI: -25.702 AMFE: -0.655 GC content %: 39.255 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01019513001 | SwissProt | 2015-06-01 | O64481 | 1.0e-7 |