Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01020029001 GSVIVG01020029001 |
chr1 | 11383122 | 11384462 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01020029001 GSVIVT01020029001 PAC:17829533 |
Low | No | 1341 | Get ORF Coding potential... Type: noncoding Potential: -0.974 Folding energies... MFEI: -18.568 AMFE: -0.626 GC content %: 29.679 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01020029001 | SwissProt | 2015-06-01 | A7PZL3 | 1.0e-17 |