Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01022898001 GSVIVG01022898001 |
chr12 | 18190766 | 18192607 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01022898001 GSVIVT01022898001 PAC:17831548 |
Low | No | 933 | Get ORF Coding potential... Type: noncoding Potential: -0.459 Folding energies... MFEI: -25.188 AMFE: -0.606 GC content %: 41.586 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01022898001 | SwissProt | 2015-06-01 | Q09151 | 6.0e-19 |