Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01023487001 GSVIVG01023487001 |
chr14 | 11056371 | 11056666 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01023487001 GSVIVT01023487001 PAC:17831927 |
Low | No | 219 | Get ORF Coding potential... Type: noncoding Potential: -0.680 Folding energies... MFEI: -21.142 AMFE: -0.609 GC content %: 34.703 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01023487001 | SwissProt | 2015-06-01 | O22806 | 2.0e-8 |