Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01026645001 GSVIVG01026645001 |
chr4 | 20782110 | 20782409 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01026645001 GSVIVT01026645001 PAC:17834290 |
Low | No | 300 | Get ORF Coding potential... Type: noncoding Potential: -0.770 Folding energies... MFEI: -26.267 AMFE: -0.536 GC content %: 49.000 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01026645001 | SwissProt | 2015-06-01 | Q8H7N9 | 2.0e-12 |