Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01027049001 GSVIVG01027049001 |
chr15 | 18367259 | 18368556 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01027049001 GSVIVT01027049001 PAC:17834573 |
Low | No | 644 | Get ORF Coding potential... Type: noncoding Potential: -0.169 Folding energies... MFEI: -24.239 AMFE: -0.576 GC content %: 42.081 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01027049001 | SwissProt | 2015-06-01 | O82337 | 2.0e-12 |