Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01028161001 GSVIVG01028161001 |
chr7 | 4307488 | 4308536 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01028161001 GSVIVT01028161001 PAC:17835370 |
Low | No | 321 | Get ORF Coding potential... Type: noncoding Potential: -0.651 Folding energies... MFEI: -20.498 AMFE: -0.477 GC content %: 42.991 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01028161001 | SwissProt | 2015-06-01 | Q6ZJD3 | 3.0e-10 |