Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01028518001 GSVIVG01028518001 |
chr7 | 9050362 | 9054220 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01028518001 GSVIVT01028518001 PAC:17835636 |
Low | No | 321 | Get ORF Coding potential... Type: noncoding Potential: -0.700 Folding energies... MFEI: -16.449 AMFE: -0.422 GC content %: 38.941 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01028518001 | SwissProt | 2015-06-01 | Q9I047 | 7.0e-9 |