Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01034825001 GSVIVG01034825001 |
chr18 | 22217638 | 22217847 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01034825001 GSVIVT01034825001 PAC:17840164 |
Low | No | 210 | Get ORF Coding potential... Type: noncoding Potential: -0.491 Folding energies... MFEI: -20.476 AMFE: -0.566 GC content %: 36.190 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01034825001 | SwissProt | 2015-06-01 | O04425 | 5.0e-7 |