Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01036309001 GSVIVG01036309001 |
chr18_random | 3672151 | 3676286 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01036309001 GSVIVT01036309001 PAC:17841278 |
Low | No | 737 | Get ORF Coding potential... Type: noncoding Potential: -0.763 Folding energies... MFEI: -25.373 AMFE: -0.617 GC content %: 41.113 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01036309001 | SwissProt | 2015-06-01 | Q9US02 | 3.0e-10 |