Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01036867001 GSVIVG01036867001 |
chr2 | 18476519 | 18476964 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01036867001 GSVIVT01036867001 PAC:17841664 |
Low | No | 374 | Get ORF Coding potential... Type: noncoding Potential: -0.825 Folding energies... MFEI: -16.818 AMFE: -0.491 GC content %: 34.225 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01036867001 | RepBase (RepeatMasker) | 2014-01-31 | Copia-54_VV-I |