Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01037414001 GSVIVG01037414001 |
chr6 | 14183083 | 14183349 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01037414001 GSVIVT01037414001 PAC:17842044 |
Low | No | 267 | Get ORF Coding potential... Type: noncoding Potential: -0.678 Folding energies... MFEI: -24.944 AMFE: -0.524 GC content %: 47.566 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01037414001 | SwissProt | 2015-06-01 | O82352 | 2.0e-12 |