GreeNC

Gene information

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name	Chrom.	Start	End	Source	Assembly	Species	Details
Zmarina_Zosma106g00730 Zosma106g00730	scaffold_106	521314	522626	Phytozome	v2.2	Zostera_marina	Coding? No

Transcript features

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name	Confidence	Pre-miRNA	Length	Sequence	Details
Zmarina_Zosma106g00730.1 Zosma106g00730.1 PAC:33176682	High	No	577		Get ORF Coding potential... Type: noncoding Potential: -0.513 Folding energies... MFEI: -24.038 AMFE: -0.616 GC content %: 38.995

Gene models

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).