Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmarina_Zosma171g00330 Zosma171g00330 |
scaffold_171 | 224805 | 228088 | Phytozome | v2.2 | Zostera_marina | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmarina_Zosma171g00330.1 Zosma171g00330.1 PAC:33185151 |
Low | No | 1346 | Get ORF Coding potential... Type: noncoding Potential: -0.100 Folding energies... MFEI: -22.712 AMFE: -0.653 GC content %: 34.770 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmarina_Zosma171g00330.1 | SwissProt | 2015-06-01 | Q75GR5 | 6.0e-15 |