Gene

Zmarina Zosma35g00760

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Zmarina_Zosma35g00760
Zosma35g00760
scaffold_35 593809 594296 Phytozome v2.2 Zostera_marina
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Zmarina_Zosma35g00760.1
Zosma35g00760.1
PAC:33183816
High No 324
Coding potential...
Type: noncoding Potential: -0.517
Folding energies...
MFEI: -20.031 AMFE: -0.536
GC content
%: 37.346


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Zosma35g00760.png