Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_AC183503.2_FG001 AC183503.2_FG001 |
3 | 141152748 | 141152981 | Phytozome | 6a | Zea_mays | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_AC183503.2_FGT001 AC183503.2_FGT001 PAC:31034904 |
Low | Yes | 234 | Get ORF Coding potential... Type: noncoding Potential: -0.628 Folding energies... MFEI: -37.991 AMFE: -0.649 GC content %: 58.547 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_AC183503.2_FGT001 | RepBase (RepeatMasker) | 2014-01-31 | Gypsy66-ZM_LTR |