Gene
Zmays AC201885.4 FG004
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
|---|---|---|---|---|---|---|---|
| Zmays_AC201885.4_FG004 AC201885.4_FG004 |
6 | 88161321 | 88161545 | Phytozome | 6a | Zea_mays | Coding? No |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
|---|---|---|---|---|---|
| Zmays_AC201885.4_FGT004 AC201885.4_FGT004 PAC:31020807 |
High | No | 225 | Get ORF Coding potential... Type: noncoding Potential: -0.585 Folding energies... MFEI: -27.822 AMFE: -0.517 GC content %: 53.778 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
