Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Zmays_GRMZM2G048434 GRMZM2G048434 |
1 | 230937870 | 230948592 | Phytozome | 6a | Zea_mays | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Zmays_GRMZM2G048434_T07 GRMZM2G048434_T07 PAC:31013571 |
Low | No | 670 | Get ORF Coding potential... Type: noncoding Potential: -0.759 Folding energies... MFEI: -28.060 AMFE: -0.593 GC content %: 47.313 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Zmays_GRMZM2G048434_T07 | SwissProt | 2015-06-01 | Q6NTU3 | 3.0e-12 |